PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU05535.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 193aa    MW: 20200.4 Da    PI: 5.7722
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU05535.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.72.9e-182374155
         AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
                + ykG+r +k++g+Wv+eIr+p     r   r++lg+f t+e+Aa a++ a+++l+g
  PHU05535.1 23 PVYKGIRKRKSSGKWVSEIREP-----RspNRIWLGTFPTPEMAAVAYDVAALALKG 74
                68*******************9.....4489***********************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    
MSSSGANSTN NSGGASNSTG RHPVYKGIRK RKSSGKWVSE IREPRSPNRI WLGTFPTPEM  60
AAVAYDVAAL ALKGRGAELN FPNSASSLPV PATNSSRDIQ AAAACAAAAL GAAGDALVGA  120
RSRPVSREAG NMAGNNDNNN HSNEGFMDED LIFDMPNVIM NMAEGMLLSP PRLNLPADDD  180
NAAGADQNLW NYP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36450.12e-42ERF family protein