PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU05642.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

G2-like

Protein Properties

Length: 415aa MW: 46601 Da PI: 6.6569

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU05642.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	106.4	1.5e-33	44	98	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprl+Wtp+LHerF+eav+qLGG++kAtPk++l+lm+++gLtl+h+kSHLQkYRl PHU05642.1 44 KPRLKWTPDLHERFIEAVNQLGGADKATPKSVLKLMGIQGLTLYHLKSHLQKYRL 98 79****************************************************8 PP
2	Myb_DNA-binding	62.6	7.9e-20	46	97	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r++WT++++e++++av+qlGg t+k++ + mg +g+tl+++ks++qky+ PHU05642.1 46 RLKWTPDLHERFIEAVNQLGGAdkaTPKSVLKLMGiQGLTLYHLKSHLQKYR 97 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 415 aa Download sequence
MYHHHHQATN MHSSTRMSFP ERHLFLQGGN ANGDSGLVLS TDAKPRLKWT PDLHERFIEA 60 VNQLGGADKA TPKSVLKLMG IQGLTLYHLK SHLQKYRLSK NHHGQANSSR DNKAAASMEK 120 ICESTGSPTS NPSIAPQPNN NIPISEAIQM QIEVQRRLHE QLEVQRHLQL RIEAQGKYLQ 180 AVLEKAQETL GTQNLGTIGL EAAKVQLSDL VSKVSNQCLN SAFSEIQELS GFHTPQTQAT 240 QRLADCSLDS CLTSSEGPLR DLQEMHNNQV GLRTLNFGPC TEDIENQARL HRTDLRWRDD 300 LKENRLFPKM DEDTEKEFAK ETNWSNLSMN VGSQGENRNV NSSYVDGRLN GIDADIKLFH 360 QAPIDRSDST KPEKQVSPQE YKLPYFAPKL DLNTDDQTDA ASSCKQLDLN GFSWN

Sequence ? help Back to Top

Protein Sequence Length: 415 aa Download sequence

MYHHHHQATN MHSSTRMSFP ERHLFLQGGN ANGDSGLVLS TDAKPRLKWT PDLHERFIEA  60
VNQLGGADKA TPKSVLKLMG IQGLTLYHLK SHLQKYRLSK NHHGQANSSR DNKAAASMEK  120
ICESTGSPTS NPSIAPQPNN NIPISEAIQM QIEVQRRLHE QLEVQRHLQL RIEAQGKYLQ  180
AVLEKAQETL GTQNLGTIGL EAAKVQLSDL VSKVSNQCLN SAFSEIQELS GFHTPQTQAT  240
QRLADCSLDS CLTSSEGPLR DLQEMHNNQV GLRTLNFGPC TEDIENQARL HRTDLRWRDD  300
LKENRLFPKM DEDTEKEFAK ETNWSNLSMN VGSQGENRNV NSSYVDGRLN GIDADIKLFH  360
QAPIDRSDST KPEKQVSPQE YKLPYFAPKL DLNTDDQTDA ASSCKQLDLN GFSWN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04030.3	1e-130	G2-like family protein