PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU05775.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 401aa    MW: 44901.2 Da    PI: 4.1704
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU05775.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.31.6e-172775355
         AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                y GVr+++ +g+WvAeI+d +   ++ r +lg++ taeeAa+a+++a+  l+g
  PHU05775.1 27 YVGVRQRP-SGKWVAEIKDTT---QKIRMWLGTYETAEEAARAYDQAAVLLRG 75
                99******.7*********32...35**********************98887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 401 aa     Download sequence    
MEINFQKQQQ TETKFKGRKR TKGSNSYVGV RQRPSGKWVA EIKDTTQKIR MWLGTYETAE  60
EAARAYDQAA VLLRGSTTRT NFSATRVSQD SPLAYRIRNL LNLKKIAKEK SLDDLVDATS  120
STTSVTSSNT SNCSSPVSNC DDQSSNLNVT ILSCDQDIIQ EFQPFDGNSN SMTSFNIIDC  180
MPANCDATMF SYCHSPITSS SAIAQTLSCD QEIIQESTTG VSVTNSNIST CDDPVSSENR  240
ERSNLYETLL SYNNNNNSVS SIIPQVESRE GSVYADATPT LEGREVVADT ETVLSCDQEV  300
TQESQLFDDS NTYKPDFDID TSSCSSFSRP ELSWDFEEWL DIPSKTEMGL TEFEVMKVER  360
QISASLYAVN GVQDYMEIIH DPYDESLWDH LLSNSWFSYS Y
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11723GRKRTKG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.19e-23ERF family protein