PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU05798.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family G2-like
Protein Properties Length: 263aa    MW: 29947.3 Da    PI: 6.3079
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU05798.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like91.76.2e-29118172155
     G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                 k+r+rWt++LH+rF+e+ ++LGG++kAtPk+il+lm+ ++Ltl++vkSHLQkYR 
  PHU05798.1 118 KTRIRWTEDLHDRFLECANRLGGADKATPKQILNLMDSESLTLDQVKSHLQKYRN 172
                 68****************************************************6 PP
2Myb_DNA-binding41.62.8e-13122171348
                      SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 
                      rWT++++++++++ ++lGg    t+k I + m  + +tl q+ks++qky+
       PHU05798.1 122 RWTEDLHDRFLECANRLGGAdkaTPKQILNLMDsESLTLDQVKSHLQKYR 171
                      9*****************99*****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    
MSSYDPQQCR NGFFEDSMVQ SEPISLPSFI SPEGPCRQYT FSDASEEERM LHLKNKLLGE  60
FDASYRRHPA LPFDGNQDYC LCHDLCGSQL TCMQQQSSSP SLTCHNSASS GATQKPSKTR  120
IRWTEDLHDR FLECANRLGG ADKATPKQIL NLMDSESLTL DQVKSHLQKY RNAKHPESAG  180
KSEKRNSLDT VTDIESKTAT EITEALKMQL EVQRCLHEQL ENQRTLQTRI EEQAKKLRMI  240
LDQQQNTNRT VLETRNSNVS SDN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06800.15e-53G2-like family protein