PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU05926.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 253aa    MW: 28922.5 Da    PI: 6.3172
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU05926.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH44.72.4e-1472124155
                 CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                 ++ +hn+ Er RR++iN+ ++ Lr+llP  +   + kKls  ++  +  +YI +Lq
  PHU05926.1  72 KKLNHNASERDRRKKINDLYFSLRSLLPAsD---HTKKLSIPSTISRILKYIPELQ 124
                 6789*************************44...6666***************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    
MLTISSPMFS TNDNFNWLLD DPISQQLNIN PIETFHSSSS SSQKNLHHCD SIKFDQNNIN  60
GNDHNQPDQA VKKLNHNASE RDRRKKINDL YFSLRSLLPA SDHTKKLSIP STISRILKYI  120
PELQSEVERL IQKKEEFTSR TISNREKSND FNKQKRIIRG GIENSSLVIS ASEVGNKEIV  180
IQISTLKNNK GSIGEAISIL EDEGLVLLNA TSFETFEDRV FHTLHFQVEG TMVVEVDMLR  240
DKLSSYFEKE DIL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56970.16e-46bHLH family protein