PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU05927.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 253aa    MW: 28447.1 Da    PI: 5.9174
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU05927.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH44.62.7e-1477129155
                 CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 ++ +hn+ Er RR++iN  ++ Lr+llP +  ++ kKls  +++ k  +YI +Lq
  PHU05927.1  77 KKLNHNASERDRRKKINGLYSSLRSLLPAS--EHTKKLSIPATVSKILKYIPELQ 129
                 6789*************************7..37777***************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    
MLAISPSSPL FSVNNNCEWL LEDLISYELN TINGENSNSD IAINSSSQKS LQHCDSIKFD  60
HQIINGGDHN QSDQTVKKLN HNASERDRRK KINGLYSSLR SLLPASEHTK KLSIPATVSK  120
ILKYIPELQN EVERLIQKKE EFTSTNVSNR EKSDDFNKQK RIIRGGIENS SLVISASEIG  180
NKEIVMQIST LKNNKGSIGE AISILEDEGL VLLNATSFET FEDRVFHTLH FQAEGTMVVE  240
VDMLRDKLSI LFL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56970.12e-44bHLH family protein