PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU05975.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NAC

Protein Properties

Length: 570aa MW: 64501.1 Da PI: 4.1774

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU05975.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	67.1	4.9e-21	4	132	3	128
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpk..kvka...eekew.yfFskrdkkyatgkrknr.atksgyWkatgkdkevl 93 G+rFhP+deel+ +yL k v+ k+ ++ + i+ d+y +Pwd+ + ++ + + k++ yfF+k +kk++ g+r r ++ g Wk +k+v+ PHU05975.1 4 LGIRFHPRDEELI-RYLLKFVSCKNYSC-DNIRLDDLYGNkKPWDIFEsnST-GgdgDAKNVkYFFTKLKKKKSDGRRFIRtVIGGGSWKGLDGEKPVY 99 59*********.9******999.7899999996549632322.2333333335**************8889************ PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 + + +lvg kk + + ++ W+m ey+l PHU05975.1 100 D-GLKLVGSKKNYRYQ-YKGYQADDVVWTMREYSL 132 .99******996.45556679******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 570 aa Download sequence
MGLLGIRFHP RDEELIRYLL KFVSCKNYSC DNIRLDDLYG NKKPWDIFES NSTGGDGDAK 60 NVKYFFTKLK KKKSDGRRFI RTVIGGGSWK GLDGEKPVYD GLKLVGSKKN YRYQYKGYQA 120 DDVVWTMREY SLDEKILKAL RRRGLIQYED VVLCCVKRKI NVHARDHKEL GDCMPMEITS 180 GDEVVAAMDA TLSTTQQPDS CLLNPFTSSD EHNNVFHELQ QDQNSEQLIN QVQNIEDMAP 240 FAQNHNGYVA SYIEQGTVNF QDSCPVYPFT SSEHNNAFQE LQQDQNSEQV NVVQGNNIEE 300 RVPFAQYHND DVTSYSVEGA TNFQNYNVDC YTGADFSSTL ADLLNDIGTQ PQLPIGVNVH 360 ARDHKELGDY TLMEIPSGDE VVAAMDGTLL TTQQHDSCLL NPFTSSEHNN VFHELQQDQS 420 SEQLINQVQT LDEMVSSDQY HNDDVTSYSE KGATNFQDYN VDCYTGYFFK ATFSSTLADL 480 LNDIGTQPQL PICVDESGYT DVAAFMSDQW SLCCEEQVQN LEEAIPITFT EPTAPLSINS 540 DGDECFPMER LLDIDDFIAS DLSWASDLFD

Sequence ? help Back to Top

Protein Sequence Length: 570 aa Download sequence

MGLLGIRFHP RDEELIRYLL KFVSCKNYSC DNIRLDDLYG NKKPWDIFES NSTGGDGDAK  60
NVKYFFTKLK KKKSDGRRFI RTVIGGGSWK GLDGEKPVYD GLKLVGSKKN YRYQYKGYQA  120
DDVVWTMREY SLDEKILKAL RRRGLIQYED VVLCCVKRKI NVHARDHKEL GDCMPMEITS  180
GDEVVAAMDA TLSTTQQPDS CLLNPFTSSD EHNNVFHELQ QDQNSEQLIN QVQNIEDMAP  240
FAQNHNGYVA SYIEQGTVNF QDSCPVYPFT SSEHNNAFQE LQQDQNSEQV NVVQGNNIEE  300
RVPFAQYHND DVTSYSVEGA TNFQNYNVDC YTGADFSSTL ADLLNDIGTQ PQLPIGVNVH  360
ARDHKELGDY TLMEIPSGDE VVAAMDGTLL TTQQHDSCLL NPFTSSEHNN VFHELQQDQS  420
SEQLINQVQT LDEMVSSDQY HNDDVTSYSE KGATNFQDYN VDCYTGYFFK ATFSSTLADL  480
LNDIGTQPQL PICVDESGYT DVAAFMSDQW SLCCEEQVQN LEEAIPITFT EPTAPLSINS  540
DGDECFPMER LLDIDDFIAS DLSWASDLFD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04410.1	5e-12	NAC family protein