PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU05976.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NF-YA
Protein Properties Length: 162aa    MW: 18491.5 Da    PI: 10.1822
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU05976.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA94.61.1e-291571158
   CBFB_NFYA  1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58
                +ep+YVNaKQy++Il+RRq Rak+  ++k+  ksrkpylheSRh+hA+rR+R  gGrF
  PHU05976.1 15 EEPMYVNAKQYHGILRRRQLRAKAVLQQKV-VKSRKPYLHESRHRHAMRRARDGGGRF 71
                69****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 162 aa     Download sequence    
MHHNGRMILP IEVKEEPMYV NAKQYHGILR RRQLRAKAVL QQKVVKSRKP YLHESRHRHA  60
MRRARDGGGR FLNTKKNNQH PTNNNNNNAT ASSEGKGGSL VSDSSANYLL NYEQDIGSSN  120
NGEGFQFQGI HGTTTENLQL GCHYQWNLND NNHCNCMHSA HF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15665RHRHAMRRAR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G12840.27e-30NF-YA family protein