PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU06050.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

SBP

Protein Properties

Length: 367aa MW: 39605.8 Da PI: 8.6439

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU06050.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	132.4	1.5e-41	68	143	1	76
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkk 76 +CqvegC+adls+ak y++rhkvC +hsk+p+++v+gleqrfCqqCsrfh+l efD++krsCrrrLa hnerrrk+ PHU06050.1 68 RCQVEGCQADLSDAKAYYSRHKVCGMHSKSPTAVVAGLEQRFCQQCSRFHQLPEFDQGKRSCRRRLACHNERRRKP 143 6*************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 367 aa Download sequence
MGTWKKSEME LSSSDSLNSL KFGKKIYFGN VGVGAPAPVT GDGAPAPAPV VSKRGRGGGV 60 VQGGQPPRCQ VEGCQADLSD AKAYYSRHKV CGMHSKSPTA VVAGLEQRFC QQCSRFHQLP 120 EFDQGKRSCR RRLACHNERR RKPPSGSLFS THYGNLSSSV FENNSSRSGS FLVDFSSHQN 180 VNESSWPNTR ASEQGWDHPS TASGKFLQRP WLNNSEKAAS ELVLQGSTTR TSYPGVPSGN 240 CFPGVSDSNG ALSLLSNRSW GSRNQPPSLG VNSQINVNET HVIQPSGSHV APTNHFSSPS 300 LGFKGNEASS SLHELPPDLG LGQMLQASDN PYCGELEIAQ HGDGRQNMEM DHSKGYHPSV 360 QNVHWTL

Sequence ? help Back to Top

Protein Sequence Length: 367 aa Download sequence

MGTWKKSEME LSSSDSLNSL KFGKKIYFGN VGVGAPAPVT GDGAPAPAPV VSKRGRGGGV  60
VQGGQPPRCQ VEGCQADLSD AKAYYSRHKV CGMHSKSPTA VVAGLEQRFC QQCSRFHQLP  120
EFDQGKRSCR RRLACHNERR RKPPSGSLFS THYGNLSSSV FENNSSRSGS FLVDFSSHQN  180
VNESSWPNTR ASEQGWDHPS TASGKFLQRP WLNNSEKAAS ELVLQGSTTR TSYPGVPSGN  240
CFPGVSDSNG ALSLLSNRSW GSRNQPPSLG VNSQINVNET HVIQPSGSHV APTNHFSSPS  300
LGFKGNEASS SLHELPPDLG LGQMLQASDN PYCGELEIAQ HGDGRQNMEM DHSKGYHPSV  360
QNVHWTL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42200.1	4e-44	SBP family protein