PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU06070.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 378aa    MW: 41127 Da    PI: 8.9801
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU06070.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.31.2e-12311356655
                 HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +++Er RR ri +++ +L+el+P+     +k  + a++L +AveYIk Lq
  PHU06070.1 311 SIAERVRRTRISERMRKLQELVPNM----DKQTNTADMLDLAVEYIKGLQ 356
                 689*********************7....688*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 378 aa     Download sequence    
MDSSEFAKNQ TSSGLLRFRS APSSFLENFI DGVGNNANIS IENKGLGSKF NLGNQLLVSQ  60
DSLDSKVLCA NLPPQYPRQN SSTSSVHVVG SMEGGGGGYR VLGSSSNSNN IHQGGQNKLV  120
GSNLMRQNSS PAGLFSQLNS LNGYATLKGG TGGYRMANGV NGDSSPSSSR LKGHFSFPSV  180
TPSSLGMLSR ISEVDNESSI ATALVDDEKR GDANSEAQLY NMGFPFTSWT DSSQFQQTLT  240
GHKRELDSEE NKQFANAQIE ELGNRPPILS HHLSLPKTPA DIAAMEKLLH FQDTIPCKIR  300
AKRGCATHPR SIAERVRRTR ISERMRKLQE LVPNMDKQTN TADMLDLAVE YIKGLQKQYK  360
VLTDCRANCK CSAMQKPD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42280.11e-86bHLH family protein