PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU06076.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NAC

Protein Properties

Length: 623aa MW: 70907.8 Da PI: 7.8133

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU06076.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	63.3	7.3e-20	2	125	2	127
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpkkvkaeekewyfFskrdkkyatgkrknr.atksgyWkatgkdkevlskkge 98 ++G+rFhP+deel+ +yL k v+ k+ ++ + i+ d+y +Pw++ k+ +++ k yfF+k +kk++ g+r r ++ g W+ +k+v++ + + PHU06076.1 2 AMGIRFHPRDEELI-RYLLKFVSCKNYSC-HNIQFEDLYGNkKPWEIFKSNSTKGKVKYFFTKLKKKKSDGRRFIRtVIGGGSWNGLDGEKSVYD-GPK 97 68**********.9*******999.779999996549**76555677788**************8889***********.999 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyr 127 vg kk + + ++ W+m e + PHU06076.1 98 IVGSKKNYRYQ-YKGYQADDVVWTMRENS 125 ****996.455556699**9966 PP

Sequence ? help Back to Top
Protein Sequence Length: 623 aa Download sequence
MAMGIRFHPR DEELIRYLLK FVSCKNYSCH NIQFEDLYGN KKPWEIFKSN STKGKVKYFF 60 TKLKKKKSDG RRFIRTVIGG GSWNGLDGEK SVYDGPKIVG SKKNYRYQYK GYQADDVVWT 120 MRENSLDEKI LKALRRRSLM HYEDVVLCCV KRKINVHARD HKELGDCMPM EITSGDEQDQ 180 NSEQLINQVQ NIEDMAPFAR NHNGYVASYI EQGTANFQDS CPVYPSTLSE HNAFQLQQDQ 240 NSEQVNVVQE NKIEETARFA QYHNDDVTSY SVEGATNFQD YNVDCYTYTG ADFSSTLADL 300 LNDIGTQPQL LIGINVHAGD HKELGDYTLM EIPSGDEVVA AMDARLLTTQ QHDSCLLNPF 360 TSSEHNNVFH ELQQDQSSSG GNKRCSFTSP LYVYNGSLAK TLLRNYILSG LQDDLYNVYS 420 GTKTSKERKS VVSQVQELQV IIQDLLAEGL IVNDAFQVAA IVEKLPPLWK DFKNYLKHKR 480 KEMTVEDLIV RLRIEEDNKA AARRSKGNST MNGAHNVEDG QNKSKKRKKV DHGSNQPKKK 540 FKGKCFNCGK IGHKSTDCRA SKKDKKKGQA NMIESNKEYD DLCAMFTECN LVGNPHEWWM 600 DSGATRHICA NKELFSSFAP AQA

Sequence ? help Back to Top

Protein Sequence Length: 623 aa Download sequence

MAMGIRFHPR DEELIRYLLK FVSCKNYSCH NIQFEDLYGN KKPWEIFKSN STKGKVKYFF  60
TKLKKKKSDG RRFIRTVIGG GSWNGLDGEK SVYDGPKIVG SKKNYRYQYK GYQADDVVWT  120
MRENSLDEKI LKALRRRSLM HYEDVVLCCV KRKINVHARD HKELGDCMPM EITSGDEQDQ  180
NSEQLINQVQ NIEDMAPFAR NHNGYVASYI EQGTANFQDS CPVYPSTLSE HNAFQLQQDQ  240
NSEQVNVVQE NKIEETARFA QYHNDDVTSY SVEGATNFQD YNVDCYTYTG ADFSSTLADL  300
LNDIGTQPQL LIGINVHAGD HKELGDYTLM EIPSGDEVVA AMDARLLTTQ QHDSCLLNPF  360
TSSEHNNVFH ELQQDQSSSG GNKRCSFTSP LYVYNGSLAK TLLRNYILSG LQDDLYNVYS  420
GTKTSKERKS VVSQVQELQV IIQDLLAEGL IVNDAFQVAA IVEKLPPLWK DFKNYLKHKR  480
KEMTVEDLIV RLRIEEDNKA AARRSKGNST MNGAHNVEDG QNKSKKRKKV DHGSNQPKKK  540
FKGKCFNCGK IGHKSTDCRA SKKDKKKGQA NMIESNKEYD DLCAMFTECN LVGNPHEWWM  600
DSGATRHICA NKELFSSFAP AQA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	525	529	KKRKK
2	525	566	KKRKKVDHGSNQPKKKFKGKCFNCGKIGHKSTDCRASKKDKK
3	526	567	KKRKKVDHGSNQPKKKFKGKCFNCGKIGHKSTDCRASKKDKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04410.1	4e-09	NAC family protein