PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU06177.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

C2H2

Protein Properties

Length: 371aa MW: 42729.9 Da PI: 8.3937

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU06177.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	19	3.7e-06	67	88	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 +C+ Cg sF + +Lk+H+++H PHU06177.1 67 VCEECGVSFQKPAHLKQHMQSH 88 6*******************99 PP
2	zf-C2H2	17.3	1.4e-05	94	118	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 + C+ dC +++rk++L+rHi +H PHU06177.1 94 FMCHvdDCQSRYRRKDHLTRHILLH 118 89********************998 PP
3	zf-C2H2	14.1	0.00014	123	148	1	23
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 ++Cp C+ +Fs + n++rH + H PHU06177.1 123 FECPvdGCKSTFSFQGNMTRHVKEmH 148 89********************9988 PP
4	zf-C2H2	19.9	2e-06	162	186	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y+C+ Cgk+F+ s L++H +H PHU06177.1 162 YVCSeaGCGKVFKYASKLRKHEDSH 186 99*******************9888 PP
5	zf-C2H2	20.7	1.1e-06	253	277	2	23
EET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCp..dCgksFsrksnLkrHirt.H 23 kC+ dC +Fs++snL +Hi++ H PHU06177.1 253 KCEfqDCQHTFSTRSNLAQHIKSvH 277 79999*****************988 PP

Sequence ? help Back to Top
Protein Sequence Length: 371 aa Download sequence
MGEEGEEQRK IVFKDIRRYY CEFCGLCRSK KSLISSHIQS HHKDEIENRK EEGTEDAKGK 60 EGSKMNVCEE CGVSFQKPAH LKQHMQSHSI ERPFMCHVDD CQSRYRRKDH LTRHILLHQG 120 KLFECPVDGC KSTFSFQGNM TRHVKEMHDQ SASPKVDLPK EYVCSEAGCG KVFKYASKLR 180 KHEDSHVKLE SIEALCLEPG CMKHFTNEKC LKEHIESCHQ HIVCEICGTK QLKKNIKRHL 240 RTHEEGPISE RIKCEFQDCQ HTFSTRSNLA QHIKSVHLGA KPFSCSISGC GMKFAFKHVR 300 DKHEKAGCHV YTPGDFEEAD ELFLSRPRGG RKREPTLFES IMRKRITPPS GTDPVFNQTP 360 EYLVVTLSGI R

Sequence ? help Back to Top

Protein Sequence Length: 371 aa Download sequence

MGEEGEEQRK IVFKDIRRYY CEFCGLCRSK KSLISSHIQS HHKDEIENRK EEGTEDAKGK  60
EGSKMNVCEE CGVSFQKPAH LKQHMQSHSI ERPFMCHVDD CQSRYRRKDH LTRHILLHQG  120
KLFECPVDGC KSTFSFQGNM TRHVKEMHDQ SASPKVDLPK EYVCSEAGCG KVFKYASKLR  180
KHEDSHVKLE SIEALCLEPG CMKHFTNEKC LKEHIESCHQ HIVCEICGTK QLKKNIKRHL  240
RTHEEGPISE RIKCEFQDCQ HTFSTRSNLA QHIKSVHLGA KPFSCSISGC GMKFAFKHVR  300
DKHEKAGCHV YTPGDFEEAD ELFLSRPRGG RKREPTLFES IMRKRITPPS GTDPVFNQTP  360
EYLVVTLSGI R

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72050.2	1e-139	C2H2 family protein