PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU06358.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family C2H2
Protein Properties Length: 145aa    MW: 16310.2 Da    PI: 8.0195
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU06358.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H217.11.6e-054870123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                ++C +C++ F ++  L+ H++ H
  PHU06358.1 48 FSCLYCSRKFCTSQALEGHQNAH 70
                89******************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 145 aa     Download sequence    
MGDLSQQQLV YGFCNQLQSN SSTTDMVDPS MIPIPKPKPK VPSSFRMFSC LYCSRKFCTS  60
QALEGHQNAH KRERAASGRN MFSTTSSTTD SFDHMIRLHF LQNNHNNDMD PSSNINPFSS  120
SSSSHGGFYT SPPPPNLEHH IFMNF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G14010.16e-14C2H2 family protein