PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU06401.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

Protein Properties

Length: 370aa MW: 42037.8 Da PI: 6.5096

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU06401.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	108.1	4.1e-34	95	208	1	99
EEEE-..-HHHHTT-EE--HHH.HTT...............---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh...............ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkl 84 f+k ltpsdv+k++rlv+pk++ae++ ++++e++ l++edesg+sW+++++y+++s++yvltkGW++Fvk+++L++gD+v+F++ PHU06401.1 95 FEKPLTPSDVGKLNRLVIPKQHAEKYfplsgnnnnsnnnnnDSSTEKGLLLSFEDESGKSWRFRYSYWNSSQSYVLTKGWSRFVKEKRLDAGDIVMFER 193 99***************************999999999877778999*********************************************9 PP -SSSEE..EEEEE-S CS B3 85 dgrsefelvvkvfrk 99 ++++ +l+++++r+ PHU06401.1 194 HRSDADRLFIGWRRR 208 8889999****98 PP

Sequence ? help Back to Top
Protein Sequence Length: 370 aa Download sequence
MSINHISSEL PEAVWWPKQQ QQYIIDSSTN KSSSSLWPPP SQFYPPQTNT MFAFNLNNNS 60 TSTINDEDEE QEQQQQEQEK EQNLEHQEIP KEHLFEKPLT PSDVGKLNRL VIPKQHAEKY 120 FPLSGNNNNS NNNNNDSSTE KGLLLSFEDE SGKSWRFRYS YWNSSQSYVL TKGWSRFVKE 180 KRLDAGDIVM FERHRSDADR LFIGWRRRNT AAAAAQDSCA AAVAPLPPGM VGPGWAQVYY 240 GGHPYPGPGA GLPYQPDCLH AGRRAMQNQT TASVNNNTRR QVRLFGVNLE CEVDESSWSE 300 PPPTSDGGGS STSSHHHGQD QASQHYYQYQ FQYSKPHVPA AASSYNNNNH HNHSDMNFSR 360 DVNQMRYHQG

Sequence ? help Back to Top

Protein Sequence Length: 370 aa Download sequence

MSINHISSEL PEAVWWPKQQ QQYIIDSSTN KSSSSLWPPP SQFYPPQTNT MFAFNLNNNS  60
TSTINDEDEE QEQQQQEQEK EQNLEHQEIP KEHLFEKPLT PSDVGKLNRL VIPKQHAEKY  120
FPLSGNNNNS NNNNNDSSTE KGLLLSFEDE SGKSWRFRYS YWNSSQSYVL TKGWSRFVKE  180
KRLDAGDIVM FERHRSDADR LFIGWRRRNT AAAAAQDSCA AAVAPLPPGM VGPGWAQVYY  240
GGHPYPGPGA GLPYQPDCLH AGRRAMQNQT TASVNNNTRR QVRLFGVNLE CEVDESSWSE  300
PPPTSDGGGS STSSHHHGQD QASQHYYQYQ FQYSKPHVPA AASSYNNNNH HNHSDMNFSR  360
DVNQMRYHQG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06250.2	5e-64	B3 family protein