PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU06410.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NAC
Protein Properties Length: 191aa    MW: 21825.2 Da    PI: 9.522
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU06410.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM78.12e-2478452128
         NAM  52 kaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                 k+++++w+fF++ + ++a+g r++r t++gyWkatg+   v+s+ +++ +g k+t+vfykgrap+g+kt+W m+ey++
  PHU06410.1   7 KHDSEQWFFFIPIQDREARGGRPTRLTTHGYWKATGTPGYVYSSsNNRIIGGKRTMVFYKGRAPNGKKTQWKMNEYKA 84 
                 56778********************99***************9877888***************************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 191 aa     Download sequence    
MAGEVIKHDS EQWFFFIPIQ DREARGGRPT RLTTHGYWKA TGTPGYVYSS SNNRIIGGKR  60
TMVFYKGRAP NGKKTQWKMN EYKATTDDDG KLRHEFSLCR VYKKSKCVRA FDRRPAGSGL  120
LLLTPHQPLI NNVDHNQAEP SNNNNNNNII GTSSSSGEHF GYNYQNNSQP VGNFNDLSET  180
PLWDFDDWNF I
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G44350.21e-48NAC family protein