PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU06451.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family M-type_MADS
Protein Properties Length: 130aa    MW: 15045.1 Da    PI: 8.4119
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU06451.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF34.72.2e-111564149
                S---SHHHHHHHHHHHHHHHHHHHHHHHH.HHT-EEEEEEE-TTSEEEEE CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSv.LCdaevaviifsstgklyey 49
                ++ien++ r vtfskR+ g+ KKA+ L     d++  +i +s++gk y +
  PHU06451.1 15 EKIENETTRLVTFSKRKSGLYKKASKLVEkYDDVNLGIISYSPNGKPYSF 64
                57***********************9975267899999999999998877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 130 aa     Download sequence    
MSERKCLGRR KIRMEKIENE TTRLVTFSKR KSGLYKKASK LVEKYDDVNL GIISYSPNGK  60
PYSFFHPTFD SVVGHFEYID TVNEEDVKRL EEWLDLVDLK LNHKLMMLEN GVASSTQAPP  120
DNAYQAYSGF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34440.11e-22M-type_MADS family protein