PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU06454.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

C2H2

Protein Properties

Length: 258aa MW: 28806.2 Da PI: 8.2631

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU06454.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.3	0.00025	113	135	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C++sF++ L H +H PHU06454.1 113 YQCKTCNRSFPSFQALGGHRASH 135 9***********99999998887 PP
2	zf-C2H2	13.5	0.00022	195	217	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg F++ L H+r+H PHU06454.1 195 HECSICGAEFNSGQALGGHMRRH 217 78********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 258 aa Download sequence
MIKMEAHQEN DHQLNMVIKR RRTKRPRPPS PLTLAITTSS CSTVEGASGG ELVDGHVANS 60 LSCVSKCTGG MDDQIVRNTN QEEEDMANCL ILLAQGHNFQ KFSAQSPMTL DVYQCKTCNR 120 SFPSFQALGG HRASHKKPKT LDDQVRNLKS IDHQVLVDNR SKLNDEDHVT TLSLQIPNSN 180 TITTTSTNKN KNRVHECSIC GAEFNSGQAL GGHMRRHRPL PNSIAITSNP NHTEESHHHH 240 HHDQQIKNTR TFLSLDLN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	24	28	KRPRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28200.1	4e-36	C2H2 family protein