PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU06477.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

MYB

Protein Properties

Length: 274aa MW: 30655.9 Da PI: 7.7239

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU06477.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	49.9	7.3e-16	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l++++ ++G+g +W + +++ g++R++k+c++rw++yl PHU06477.1 14 KGPWSPEEDAKLKEYIDKFGTGgNWIALPQKAGLKRCGKSCRLRWLNYL 62 79*********************************************97 PP
2	Myb_DNA-binding	37.6	5.3e-12	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g ++ eEd + + + G++ W+ Ia+ ++ gRt++++k++w++ PHU06477.1 69 GEFSDEEDRVICSLYANIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111 789****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 274 aa Download sequence
MGRAPCCDKA NVKKGPWSPE EDAKLKEYID KFGTGGNWIA LPQKAGLKRC GKSCRLRWLN 60 YLRPNIKHGE FSDEEDRVIC SLYANIGSRW SIIAAQLPGR TDNDIKNYWN TKLKKKLMGF 120 VSSSHKIKPL NHHHYQHQIP TNYNYNNYSP QISLFQTSSL LISSNYNTNT NNTTFPCYDI 180 NAPISNFLSN GASTSCTSGI TTSTFQENNF VGPTATSSDE SYGVSNLDFR TYMYNNGVIG 240 EEGEDQGNSK FLISGNNDGG GCYVDEQQNP LDYS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57620.1	1e-79	MYB family protein