PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU06642.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family S1Fa-like
Protein Properties Length: 69aa    MW: 7630.31 Da    PI: 10.7353
Description S1Fa-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU06642.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1S1FA136.85e-43369470
        S1FA  4 akveakGlnPGlivllvvgglllvflvgnyilyvyaqknlPPrkkkPvskkklkreklkqGvavPGe 70
                + ve+kGlnPGlivl+v+ggl+l+fl+gny ly+yaqk+lPP+kkkPvskkk+k+e+lkqGv++PGe
  PHU06642.1  3 NDVEVKGLNPGLIVLIVIGGLVLTFLIGNYFLYMYAQKTLPPKKKKPVSKKKMKKERLKQGVSAPGE 69
                689***************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 69 aa     Download sequence    
MANDVEVKGL NPGLIVLIVI GGLVLTFLIG NYFLYMYAQK TLPPKKKKPV SKKKMKKERL  60
KQGVSAPGE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37120.13e-07S1Fa-like family protein