PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU06739.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family MIKC_MADS
Protein Properties Length: 206aa    MW: 23563.4 Da    PI: 10.5312
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU06739.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF75.93.1e-242577151
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TT..SEEEEEE- CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsst..gklyeyss 51
                k+i++k  rqvtf+kRr+g++KKA+ELS+LCd++v v+i+s++  g+l+e+s+
  PHU06739.1 25 KKIQDKNCRQVTFCKRRKGLMKKANELSILCDVDVGVVIISNNgtGRLHEFSN 77
                689**************************************972257***985 PP
2K-box35.73.6e-131101792796
       K-box  27 eienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrk 96 
                   e Lq++ R++   + +  s+ +L +Le++L+++l +iRs+K++l+le+++ l ++ek lqee+k L++
  PHU06739.1 110 IGELLQTTERQFEETNADGFSVTDLVHLENELQTALIQIRSTKTHLMLESVKGLHEQEKLLQEEKKLLKN 179
                 457899999*********************************************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 206 aa     Download sequence    
MGTCGNIGLG LKKKKKMGRR KLEIKKIQDK NCRQVTFCKR RKGLMKKANE LSILCDVDVG  60
VVIISNNGTG RLHEFSNTNS VTGILQRYKS HIKEEKEISG EHSKYSSMKI GELLQTTERQ  120
FEETNADGFS VTDLVHLENE LQTALIQIRS TKTHLMLESV KGLHEQEKLL QEEKKLLKNN  180
RARMKKNRKV NGMSDLPPQR VTLNFL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65070.19e-30MIKC_MADS family protein