PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU06886.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

WRKY

Protein Properties

Length: 214aa MW: 24121 Da PI: 8.2925

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU06886.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	101.3	5.7e-32	51	107	2	58
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnh 58 dDgy+WrKYGqK++k+s++prsYY+Ct ++C +kk+vers+++p++++itYeg H h PHU06886.1 51 DDGYKWRKYGQKSIKNSPYPRSYYKCTNPRCGAKKQVERSSNEPDTFIITYEGLHLH 107 8******************************************************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 214 aa Download sequence
MTRNGVQSHD VSHDARNIGL ERGLNLMMNK QEALENKYTL RIKTCGNAMA DDGYKWRKYG 60 QKSIKNSPYP RSYYKCTNPR CGAKKQVERS SNEPDTFIIT YEGLHLHFAY PFITLNPPQF 120 LDQPTKKPKL TNPKAQNNEE NASEVDESPK FVNPSPTVDL EDGLGFGEIG SQGLLEDMVP 180 LMIRNPFIKP TNSYSSSCSY SSPPTSPSFS WSNN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G43290.1	5e-42	WRKY family protein