PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU06952.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 371aa    MW: 42454.8 Da    PI: 4.1781
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU06952.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.73.2e-191371256
         AP2  2 gykGVrwdkkrgrWvAeIrdpse.ng...kr.krfslgkfgtaeeAakaaiaarkklege 56
                 y+GVr++  +g+WvAeIr+p++  +    + kr +lg+f t  eAa+ +++a+k+++g+
  PHU06952.1 13 TYRGVRQRI-WGKWVAEIREPVNnTNehqSNgKRLWLGTFSTDAEAARTYDEAAKAMYGH 71
                69****998.**********777444695449*************************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 371 aa     Download sequence    
MRGKGGPENL ECTYRGVRQR IWGKWVAEIR EPVNNTNEHQ SNGKRLWLGT FSTDAEAART  60
YDEAAKAMYG HDAILNFPEY CVQNAQLAND LLHVPIAQTT SLESSESSVE DAIVESDLQT  120
DEKIFVDDRC VVERNLCLVE KHGSSDCCLN TKSVVLQVYH SIDAIKGFNC SSTIDLEPIR  180
EPTSSYVKVE TPPKNDFMQH RDLERLDDVN EGSNNLCILY QENTEVKSNY SMYHKDVLRP  240
NESYDFVDQV LLPCPATTPQ DYDCSANTLQ EQPLDFRLNA DMRSNMGFME RLLMEDNNTT  300
EATNILNTFC LNENIDESYQ FQSFLDELSD VNNLKNEEQF DYFNYNQQIN LPNYQTNAAV  360
HSDGFISKED E
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75490.17e-30ERF family protein