PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU07195.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 351aa    MW: 38888 Da    PI: 9.3536
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU07195.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH51.51.8e-16163209455
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  hn  ErrRRdriN+++  L+el+P +      K +Ka++L +A+eY+ksLq
  PHU07195.1 163 VHNLSERRRRDRINEKMRALQELIPRC-----NKTDKASMLDEAIEYLKSLQ 209
                 6*************************8.....6******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 351 aa     Download sequence    
MEVKRINDRL MTIKLVIRVF TLNVCSAYAP QVGSDGEEKM RFWEALEEVV RGVPSSEKIV  60
VAGDFNEHIG ALSGGFGDMH GGLVLGREMK RGRPYWSLRG LLGWEPLVLR AESSHKLTGL  120
VTTRPNDSSG HPTTHRDTEF ESPDTKKQAR GSTSTKRSRA TEVHNLSERR RRDRINEKMR  180
ALQELIPRCN KTDKASMLDE AIEYLKSLQL QVQMMSMGCG MVPMMYPGVQ QYISPMGMGI  240
GMGMGMEIGM NRPMVPYPPL LPGAMMQNAA AAAAAAQMGP RFPMPPFHLP PVPVDPLQAS  300
SQPDPTLNPL VAHNPNQPRL PNFNDPYQQF FGLHQAQVAL PQASLPLLLN P
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1168173ERRRRD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G20180.14e-35bHLH family protein