PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU07240.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 235aa    MW: 27008.3 Da    PI: 9.531
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU07240.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP238.62.6e-12107148351
         AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 
                  +GV++  k+ +W A I++      +k+++lg+ gt eeAa+++++a+ 
  PHU07240.1 107 MRGVYF--KNMKWQAAIKVD-----KKQIHLGTVGTQEEAARLYDRAAF 148
                 79**98..47*********4.....5********************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    
MVSIRRRKLL GLCSGRSTFL VPLPKFSEND HFAEHRFFNN RPTSVHPMTS TDIDESKEKI  60
AIKVVPGTSN SHASGSLMEQ TAQQFPEVKR RKRHRRKHFE NQEPCLMRGV YFKNMKWQAA  120
IKVDKKQIHL GTVGTQEEAA RLYDRAAFMC GREPNFELSE EEKQELRQFK WDDFLAFTRS  180
AITNKKTRRR SGAGARRKSE PLTSALNSEE EEEGGEPESN GFSASEDIEH DVSFS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13040.11e-46ERF family protein