PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU07258.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

HSF

Protein Properties

Length: 248aa MW: 29063.1 Da PI: 7.1162

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU07258.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	112.8	2.3e-35	14	106	2	103
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl k ye++ede+++ lisw++++nsf+++d +f++++LpkyFkhsnf+SF+RQLn+YgF+k+++++ weF ++sF kg+k+ l++i PHU07258.1 14 FLLKCYEMVEDESTDGLISWNKSENSFIIWDVPKFSSELLPKYFKHSNFSSFIRQLNIYGFHKTDTDR---------WEFLNDSFLKGRKHFLKNIV 101 9*************************************************************9999.........****************** PP XXXXX CS HSF_DNA-bind 99 rkkse 103 r+k++ PHU07258.1 102 RRKQS 106 *9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 248 aa Download sequence
MVRSFEDGVS VAPFLLKCYE MVEDESTDGL ISWNKSENSF IIWDVPKFSS ELLPKYFKHS 60 NFSSFIRQLN IYGFHKTDTD RWEFLNDSFL KGRKHFLKNI VRRKQSSVVQ KKPSQPEETK 120 SCTSEETKSL KLWKVVENLK VDKNVLKQEL VKLREHQQNS ESKLILLREQ LKVMEKNQQQ 180 MLSFIVMAMQ CPSFFVQFFQ PKENNLRMTE NGNNILSEVE DDCEDFPSDR AIVRYHPPTH 240 GEAAAAEP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67970.1	6e-76	HSF family protein