PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU07409.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family FAR1
Protein Properties Length: 297aa    MW: 34790 Da    PI: 8.1105
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU07409.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR132.82.2e-101289291
        FAR1  2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91
                fY+e++  +GF v+k++ kk    g+ +  tf C k  k+++++++          + ++Cka+++ + ++dg   vtk+ le nHel p
  PHU07409.1 12 FYKEHSCLTGFGVVKKSAKKL--AGQLKYVTFGCDKCRKTTTRNQS----------KMVDCKARVNCQVMNDGLCIVTKVILEYNHELEP 89
                9***************98887..8999********99888876555..........99*****************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    
MSFHCVQAGF VFYKEHSCLT GFGVVKKSAK KLAGQLKYVT FGCDKCRKTT TRNQSKMVDC  60
KARVNCQVMN DGLCIVTKVI LEYNHELEPV LSRFLPSHRE LSRTVKRSLV AHDIAGLRPS  120
KSIRLLETNG EIPPTTILTD QCESIKAAFR EVLPNTIHRF NYEKELESQA SERKHLVRLT  180
IAFDWDMQIY GHYTCAIYNF FRVHVVRLPH CEIKSHVNFD AVERVEPTEE SFDDIQRDTE  240
QLFKEMVELD EQLIRSQERL EFMMIRVNVM KERIEVTRKE TFDRYRKDQD NFIPPST
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76320.25e-07FAR1 family protein