PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU07668.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

Trihelix

Protein Properties

Length: 367aa MW: 40621.7 Da PI: 8.765

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU07668.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	44.7	3.5e-14	96	186	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W++ +++L+ea + +l+rg+l++++W+ev++++ + ++ r+ +qCk++++ l+k+yk +k++ ++ + + + ++p+f+ l+ PHU07668.1 96 CWSEAATHTLMEAWGSHYLELKRGNLRQKHWQEVANAVnalhgHTKKQYRTDVQCKNRIDTLKKKYKIEKARVSQSHGRYVPQWPFFNGLD 186 7***********************************999987778889******************9999999999***9886 PP

Sequence ? help Back to Top
Protein Sequence Length: 367 aa Download sequence
MYRRLNHTEY FSFSPVSSSS NPNSSNTVQL SHSAAVTSPM SDDDLVASPS LNNNSPSPSP 60 SQSPTRNELV PLPPLPEIPT PAASTRLAAF PSREDCWSEA ATHTLMEAWG SHYLELKRGN 120 LRQKHWQEVA NAVNALHGHT KKQYRTDVQC KNRIDTLKKK YKIEKARVSQ SHGRYVPQWP 180 FFNGLDVLIG DNFKPSPSPV MVTASPAMVT NRRKTPPLLP PPPSAVPVGP RSKRPAAVME 240 DAVSRRNFST MAAAAAAAAS EDTEEEVEEE ESETSSPATI TGTGGLSRRK ENGALAEGCS 300 RLAEAIGRFA EIYERVEDAK QRQMVELEKQ RMQFAKDLEI QRMKLIMESQ VQLEKLKRAK 360 NSTQDGE

Sequence ? help Back to Top

Protein Sequence Length: 367 aa Download sequence

MYRRLNHTEY FSFSPVSSSS NPNSSNTVQL SHSAAVTSPM SDDDLVASPS LNNNSPSPSP  60
SQSPTRNELV PLPPLPEIPT PAASTRLAAF PSREDCWSEA ATHTLMEAWG SHYLELKRGN  120
LRQKHWQEVA NAVNALHGHT KKQYRTDVQC KNRIDTLKKK YKIEKARVSQ SHGRYVPQWP  180
FFNGLDVLIG DNFKPSPSPV MVTASPAMVT NRRKTPPLLP PPPSAVPVGP RSKRPAAVME  240
DAVSRRNFST MAAAAAAAAS EDTEEEVEEE ESETSSPATI TGTGGLSRRK ENGALAEGCS  300
RLAEAIGRFA EIYERVEDAK QRQMVELEKQ RMQFAKDLEI QRMKLIMESQ VQLEKLKRAK  360
NSTQDGE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G58630.1	5e-62	Trihelix family protein