PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU07685.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

LBD

Protein Properties

Length: 132aa MW: 14659.7 Da PI: 6.7851

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU07685.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	35	3.9e-11	12	54	55	97
DUF260 55 edamsslvyeAearardPvyGavgvilklqqqleqlkaelall 97 ++++sl++eA+ r+ +Pv+Gavg++++++++++q+++e++l PHU07685.1 12 AALFQSLLFEACERTVNPVHGAVGLLWTGNWHVCQSAVETVLK 54 6789*********************************998765 PP

Sequence ? help Back to Top
Protein Sequence Length: 132 aa Download sequence
MEQRTYLSPA SAALFQSLLF EACERTVNPV HGAVGLLWTG NWHVCQSAVE TVLKGGVLRL 60 LLEFSGVATS PVEFYSASEA NDVDLFRSRS SNFKSKRKVM DEIAEDLDLG LSPRTMVAAG 120 ERRNEGLFLH RR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37540.1	4e-25	LBD family protein