PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU07687.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family C2H2
Protein Properties Length: 146aa    MW: 16528.3 Da    PI: 7.6436
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU07687.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.90.000334870123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                ++C +C++ F ++  L  H++ H
  PHU07687.1 48 FSCLYCSRNFYTSQALGGHQNAH 70
                89******************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 146 aa     Download sequence    
MADLSQQQLV YDFCNQLKSN SSTTDMVDPS MILIPKPKPK VPSSSRMFSC LYCSRNFYTS  60
QALGGHQNAH NHERAPSCRN MFSTTSTTTD SSDHMIRLHF LQNNHNNDMD PSSNINPFSS  120
SSSSHDGFYT PPPPPNLRHH IFMNFQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G14010.17e-13C2H2 family protein