PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU07764.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family MYB_related
Protein Properties Length: 86aa    MW: 9745.85 Da    PI: 4.4879
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU07764.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding33.31.1e-103779145
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
                     ++ ++++E+ l  + +++ G + W++Ia +++ gRt++++  +w+
       PHU07764.1 37 KLEFSEDEEFLVTKMFNLVGER-WSLIAGRIP-GRTAEEIEKYWN 79
                     678*******************.*********.***********8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 86 aa     Download sequence    
MQGKAAYDTH LCGVPFPVQK ESLGVTAFEA NNEETSKLEF SEDEEFLVTK MFNLVGERWS  60
LIAGRIPGRT AEEIEKYWNS RNSTSQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01380.12e-17MYB_related family protein