PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU07850.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

DBB

Protein Properties

Length: 299aa MW: 32148.2 Da PI: 4.6749

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU07850.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	18	6e-06	4	47	5	42
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42 C+ +e e++ C ++ lC C ++ H H++vpl PHU07850.1 4 QCNACEIAEAKVLCCADEAALCWYCDDKVHAAnklankHQRVPL 47 7****99*******************66889999999986 PP
2	zf-B_box	29.4	1.6e-09	53	94	2	37
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg......H 37 ++kC+ ++e +fC +++ llC++C ++H+ H PHU07850.1 53 PMPKCDICQETVGYFFCLEDRALLCRKCDISIHSVnayvsaH 94 689******9*******************435555555 PP

Sequence ? help Back to Top
Protein Sequence Length: 299 aa Download sequence
MKIQCNACEI AEAKVLCCAD EAALCWYCDD KVHAANKLAN KHQRVPLSAS SSPMPKCDIC 60 QETVGYFFCL EDRALLCRKC DISIHSVNAY VSAHQRFLLT GVKVGLEPID PPGSASSGKS 120 PPIQKVVEQE SPPIPKSIAP VSSVAPSNGI LPVHTSETGD FAPSRLPSVG GSAAGIIPQW 180 QFDEFLGMGD FNQSYGYMDY GPSKADNGKL GESASSPILK DADAVVEGDD CFSTEVPDTC 240 WAVPQISSLP TASGLHWPTE TIQNPFDAAL LESDASYFPL QNIQDQQSNG SCFKRSRHF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78600.1	1e-87	DBB family protein