PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU08090.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family B3
Protein Properties Length: 155aa    MW: 18204.2 Da    PI: 4.4657
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU08090.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B341.32.8e-13292384
                EE-..-HHHHT.T-EE--HHH.HTT.........---....--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE CS
          B3  3 kvltpsdvlks.grlvlpkkfaeeh.........ggkke..esktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkl 84
                k lt+sdv ++ grl l ++ ++++         +       +++++ +d+ g+ ++++++ +++ ++yvl + W++F ++++L+e+D v++ +
  PHU08090.1  2 KNLTKSDVDEHqGRLLLNNEDVKKNlspilekkfE---YlvDGIEVKTYDPMGKYYKMRFKTWGNYKSYVLVGSWRHFIQQHELEENDCVTIWM 92
                78999***999899***********9998766552...0447889***************99***************************99653 PP
Sequence ? help Back to Top
Protein Sequence    Length: 155 aa     Download sequence    
MKNLTKSDVD EHQGRLLLNN EDVKKNLSPI LEKKFEYLVD GIEVKTYDPM GKYYKMRFKT  60
WGNYKSYVLV GSWRHFIQQH ELEENDCVTI WMFKHSVNGE FCFALTWKKD EDDDEEEEEA  120
AARVVGTDPD AFRSEDEEAQ VVGSDGWHGS RDIQE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G03170.11e-21B3 family protein