PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU08108.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

ERF

Protein Properties

Length: 551aa MW: 58746 Da PI: 5.7923

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU08108.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	53.9	4.5e-17	84	134	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y GVr + +g+Wv+eIr+p++ + r++lg+f t+e+Aa+a++ a+ +++g PHU08108.1 84 SSYVGVRMRA-WGKWVSEIREPKK---KSRIWLGTFATPEMAARAHDVAAMSIKG 134 679**998.******854...6********************99987 PP

Sequence ? help Back to Top
Protein Sequence Length: 551 aa Download sequence
MFVDQPNCSD SATESSCNSS SSSPSPVLLH KLPQINSKNR LKRCGEEQEG TDEIEEVVHD 60 VRTSKKNCGN VVKSNNNNNP TSSSSYVGVR MRAWGKWVSE IREPKKKSRI WLGTFATPEM 120 AARAHDVAAM SIKGNSANLN FPQFADLLPR PATCCPRDIQ AAAVKAAHMD HLNPTTTTSL 180 APASMMMMTS SSSSSGVTSS SSCKDDEESS AKGQGNQSLS TTQKIVVGSS MTSSYSELSL 240 VSGITSSFSL QEDEEEESAK DQSNQSLSTT QQTTEIFDLA PPKLVGEIVE ASLMRSSYSE 300 LSLVSNITSS SSSQNDDKEN IDHSLTMTHK TTEIFDLAPK LGEIVELPRL GMSYQLVVAL 360 SINIYASFVQ RGFSGKAIVV HKPHEGLNLI GDIKLPNPSG ESVGSLVSPL TGGSVLIDTF 420 TGESAMPSKS PKRGILAEMG VLHENVLHSA GNVGRDIKGK GNEVQFSIPL DIFNHNLVGG 480 ICVRTLDNGR GGRYPRDLSI FPSIYFNAIL CGPKQDILAE VPTVGYVAPS PGTLVVALST 540 SPVLSNEGAG P

Sequence ? help Back to Top

Protein Sequence Length: 551 aa Download sequence

MFVDQPNCSD SATESSCNSS SSSPSPVLLH KLPQINSKNR LKRCGEEQEG TDEIEEVVHD  60
VRTSKKNCGN VVKSNNNNNP TSSSSYVGVR MRAWGKWVSE IREPKKKSRI WLGTFATPEM  120
AARAHDVAAM SIKGNSANLN FPQFADLLPR PATCCPRDIQ AAAVKAAHMD HLNPTTTTSL  180
APASMMMMTS SSSSSGVTSS SSCKDDEESS AKGQGNQSLS TTQKIVVGSS MTSSYSELSL  240
VSGITSSFSL QEDEEEESAK DQSNQSLSTT QQTTEIFDLA PPKLVGEIVE ASLMRSSYSE  300
LSLVSNITSS SSSQNDDKEN IDHSLTMTHK TTEIFDLAPK LGEIVELPRL GMSYQLVVAL  360
SINIYASFVQ RGFSGKAIVV HKPHEGLNLI GDIKLPNPSG ESVGSLVSPL TGGSVLIDTF  420
TGESAMPSKS PKRGILAEMG VLHENVLHSA GNVGRDIKGK GNEVQFSIPL DIFNHNLVGG  480
ICVRTLDNGR GGRYPRDLSI FPSIYFNAIL CGPKQDILAE VPTVGYVAPS PGTLVVALST  540
SPVLSNEGAG P

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G11590.1	5e-41	ERF family protein