PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU08141.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family GATA
Protein Properties Length: 330aa    MW: 36229.9 Da    PI: 9.8479
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU08141.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA59.83.5e-19142175134
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                 Cs C+ttkTplWR+gp g+k+LCnaCG+++rk +
  PHU08141.1 142 CSDCNTTKTPLWRSGPKGPKSLCNACGIRQRKAR 175
                 *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    
MNIPTYTNSS SSSFPFELNN NEVQYDLSQY NSYQFASSSS NSSCQNFFNI STTNIHDQSG  60
YDHFHSQFHQ PQHQHEVDNF GSRSSGSHDQ LEKKNKGLKL TLWKNKGVQK LKNNNLDYTN  120
SKLKLEDQND YNNNNIIPIR VCSDCNTTKT PLWRSGPKGP KSLCNACGIR QRKARRAAAA  180
AAAAATNGTN VSSTETSSTT TTITTTTKVK VQQQKNKTTK VNTNHVVPFK KRCKFLSTTT  240
TAPAPAPAAT ATATAAATAH CTLVGSSSSS SSYNNNNNNN NNNTNQKQKL CFEDFFVNLS  300
NNLAIHRVFP QDEKEAAILL MALSSGLVHG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56860.18e-21GATA family protein