PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU08193.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NF-YA
Protein Properties Length: 221aa    MW: 24624.5 Da    PI: 9.2039
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU08193.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA103.71.7e-32116172158
   CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                 d p+YVNaKQy++Il+RRq Rakle+++kl  k+rkpylheSRh hA++R RgsgGrF
  PHU08193.1 116 DGPIYVNAKQYHGILRRRQIRAKLEAQNKL-VKNRKPYLHESRHLHAVNRVRGSGGRF 172
                 57****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 221 aa     Download sequence    
MKSLDPDLQG ETLRLTHSTI NSQDEMTASA KTNSQDQCAS SEYVHDERYG RDMQVQMKPA  60
LFPLQNEVAH STGFSAFGYS DPYISGLYTA YGPQPFPQMM GIAPARVPLP VDIAEDGPIY  120
VNAKQYHGIL RRRQIRAKLE AQNKLVKNRK PYLHESRHLH AVNRVRGSGG RFLSSKKALQ  180
TDPNSYPANS TSSRDSVEHE GSTSAFSSVR QDVIHNGISF Q
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72830.12e-42NF-YA family protein