PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU08363.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

Protein Properties

Length: 377aa MW: 42336 Da PI: 8.1265

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU08363.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	99.1	2.6e-31	74	179	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SS.SEE.. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.gr.sefel 92 f+kv tpsdv+k++rlv+pk++ae++ +++ +++ l +ed++g+ W+++++y+++s++yv+tkGW++Fvk+++L++gD+v F++ g+ s+ +l PHU08363.1 74 FDKVVTPSDVGKLNRLVIPKQHAERYfpldsSSNDKGGLLLNFEDSNGKPWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGaGElSKHRL 172 89**************************955666889***********************************************77699999999 PP EEEEE-S CS B3 93 vvkvfrk 99 ++ ++r+ PHU08363.1 173 FIDWRRR 179 9999997 PP

Sequence ? help Back to Top
Protein Sequence Length: 377 aa Download sequence
MNFFGSRREI QQEEADSSKG MCPFSSSASS SSYQQKRPSS NESSTELMLM DSSPVDGGED 60 PHHHPGMIER EHMFDKVVTP SDVGKLNRLV IPKQHAERYF PLDSSSNDKG GLLLNFEDSN 120 GKPWRFRYSY WNSSQSYVMT KGWSRFVKEK KLDAGDIVSF QRGAGELSKH RLFIDWRRRP 180 DHDINNHFML PPHHFSNGRL FPLHPYPTTY SHNLLLEGGG SSNISITQRP NYYNPHSYIY 240 GIGGNSNNTT TTSTPYYMMS TSFNNNSTMA TMVNGNPFNN VMMRSGAAAQ GCSTNSSVVE 300 PRVFNSVPVV QGKVAAKRLR LFGVNMDCPM DHSDMSSIPT TTTSSYLQFS SSLRNFNNSP 360 MPSEESSEKG KSFDLDI

Sequence ? help Back to Top

Protein Sequence Length: 377 aa Download sequence

MNFFGSRREI QQEEADSSKG MCPFSSSASS SSYQQKRPSS NESSTELMLM DSSPVDGGED  60
PHHHPGMIER EHMFDKVVTP SDVGKLNRLV IPKQHAERYF PLDSSSNDKG GLLLNFEDSN  120
GKPWRFRYSY WNSSQSYVMT KGWSRFVKEK KLDAGDIVSF QRGAGELSKH RLFIDWRRRP  180
DHDINNHFML PPHHFSNGRL FPLHPYPTTY SHNLLLEGGG SSNISITQRP NYYNPHSYIY  240
GIGGNSNNTT TTSTPYYMMS TSFNNNSTMA TMVNGNPFNN VMMRSGAAAQ GCSTNSSVVE  300
PRVFNSVPVV QGKVAAKRLR LFGVNMDCPM DHSDMSSIPT TTTSSYLQFS SSLRNFNNSP  360
MPSEESSEKG KSFDLDI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46870.1	5e-69	B3 family protein