PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU08488.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family WRKY
Protein Properties Length: 255aa    MW: 28804.8 Da    PI: 9.6712
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU08488.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY85.54.9e-27105166159
                 ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                 ldDgy+WrKYGqK++ g+ +prsYYrC +    gC ++k+v+rs++dp++ eitY+++H+++
  PHU08488.1 105 LDDGYSWRKYGQKDILGAYYPRSYYRCRYWllrGCAATKQVQRSNDDPTISEITYKDTHTCR 166
                 59**************************97788***************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    
MEHTKQLRTY LSSVSSTSES TPNLLLQKIL SSYEQSLLIL KRTGSTGGAN KPPPASDNRS  60
HRGDDKKRSF KDHPELIDIP KKRKSQPRWT QQVNVRTESG FEGPLDDGYS WRKYGQKDIL  120
GAYYPRSYYR CRYWLLRGCA ATKQVQRSND DPTISEITYK DTHTCREVTN SALQPKSPEK  180
QANHQGYSPS FASPAATESN YLSVSGSQMN SFGRVHNSNH SKSYLSDIGI IQNLYHSDSD  240
RTYTLSANTS TTSFD
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16684KKRSFKDHPELIDIPKKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.12e-37WRKY family protein