PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU08540.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 246aa    MW: 27834.9 Da    PI: 5.4312
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU08540.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.11.1e-1863113256
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                  y+GVr++  +++Wv+eIr+pse   +kr++lg++ t+e+Aa+a++  +++l+g+
  PHU08540.1  63 IYRGVRRRN-NNKWVCEIREPSE---QKRIWLGTYPTPEMAARAHDVVALALRGN 113
                 69****887.8*********976...5*************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    
MNNNNNNLIS YFSDFSMTNL ERDHSQETSS SSSEKSGGGL LLAANRPKKR AGRKKFKETR  60
HPIYRGVRRR NNNKWVCEIR EPSEQKRIWL GTYPTPEMAA RAHDVVALAL RGNLATLNFE  120
DSSWRLSVPV SKDPKELRQA AIKAANAFHQ DSYKSVGIDY MNQEVNSDDV VGDGASGGDK  180
YNIQNMDILC CNNWGENNEM LEIEGLSWQE KMAEGLLFSP TPRLGSCFSW DDVESDVEVS  240
LWSYDI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51990.15e-53ERF family protein