PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU08541.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 229aa    MW: 25866.8 Da    PI: 5.0312
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU08541.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.39.5e-194797256
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                 y+GVr++  +++Wv+eIr+pse   +kr++lg++ t+e+Aa+a++  +++l+g+
  PHU08541.1 47 IYRGVRRRN-NNKWVCEIREPSE---QKRIWLGTYPTPEMAARAHDVVALALRGN 97
                69****887.8*********976...5*************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    
MENLERDHSQ ETSSSSSEKS GGGLLLAANQ PKKRAGRKKF KETRHPIYRG VRRRNNNKWV  60
CEIREPSEQK RIWLGTYPTP EMAARAHDVV ALALRGNLAI LNFEDSSWRL PVPVSKDPKE  120
LRQAAMIAAN AFHQDSDESV GVDYMNQEIN SNDVVGGGAS GSDNNIQNMD ILCCNNWGEN  180
NEMLEIEGLS WQEKMSEELL FSPTPRFGSC YSWDDVKSDV EVSLWSYNI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G63030.22e-51ERF family protein