PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU08542.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 156aa    MW: 17748 Da    PI: 10.1013
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU08542.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.75.1e-1759110156
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                 s y+GVr++  +++W++eIr+pse   +kr++lg++ t+e+ a+a++  +++l+g+
  PHU08542.1  59 SIYRGVRRRN-NNKWACEIREPSE---QKRIWLGTYPTPEMTARAHDVVALALRGN 110
                 57*****887.8*********976...5*************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 156 aa     Download sequence    
MWIWVLRYET NKLITANLES DHSQETSSSS EKSGGGLLLA ADRPKKHAGR EKFKETRHSI  60
YRGVRRRNNN KWACEIREPS EQKRIWLGTY PTPEMTARAH DVVALALRGN LGTLNFEDSS  120
WSLLVPVSKD PKELRQVAIK AANAFHQDSY KSVGID
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12610.16e-47ERF family protein