PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU08572.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family B3
Protein Properties Length: 256aa    MW: 30256.1 Da    PI: 4.7755
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU08572.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B347.63.1e-15132218595
                 -..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
          B3   5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                 +++++ l+++ ++lp +fa+++g+    + ++++ de+ rsW+v +   + +g  + +++GW +F k+ng+++gD+  F+l++ +++ +vv+
  PHU08572.1 132 TIKPYCLSKHFVYLPMDFAKSNGLMD--KHEMIIVDEKRRSWSVWI--GRIDGFhFGIKRGWTQFRKENGVQVGDTYRFELTN-NGTIPVVH 218
                 5789999***************7774..348999************..7777776889**********************976.55556665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    
MNGRRLEDGW EKFAEEHDLQ LGDMLIFRHE GDMEFDVSIF DSTHCDTKYA EYMQILEEKD  60
KKVEDKNEDD EVVEDENDEE DEDDEAYTHD KPFGQSHFEF TIRQYCLSKG KTFSNVEAVK  120
DSNLSHSHFI CTIKPYCLSK HFVYLPMDFA KSNGLMDKHE MIIVDEKRRS WSVWIGRIDG  180
FHFGIKRGWT QFRKENGVQV GDTYRFELTN NGTIPVVHFH FLLLMLIAGW LQHFSLVDII  240
GYALRQLKFV WIECLT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24700.11e-25B3 family protein