PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU08595.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family B3
Protein Properties Length: 186aa    MW: 21316.7 Da    PI: 10.0004
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU08595.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B354.81.7e-17790894
                -HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
          B3  8 sdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94
                + vl + ++++pk+fa+e+g+  ++++ l+++de+ rsW+v l  r + + + l++GW++  +an LkegD ++F+ +   + ++  
  PHU08595.1  7 PKVLLLENMCIPKQFARENGHFDTKERNLIVTDERQRSWNVIL--RAYHDNVDLRSGWSNIRDANCLKEGDRITFEIVT-GGNKPIW 90
                56777788***********777788889***************..*******************************764.4555555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 186 aa     Download sequence    
MYVEGNPKVL LLENMCIPKQ FARENGHFDT KERNLIVTDE RQRSWNVILR AYHDNVDLRS  60
GWSNIRDANC LKEGDRITFE IVTGGNKPIW KMHRSRPLIG ASISCVSSVS RASLDLVHSV  120
CTKYKFRTLG MLKVCLRRVL KFSDGIRDRA SVLGPHCVGR SPKIGYALQR PFPENRYYIV  180
EAIPPE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31630.13e-10B3 family protein