PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU08635.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family Trihelix
Protein Properties Length: 161aa    MW: 18173.6 Da    PI: 8.8781
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU08635.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix52.99.9e-1768132264
    trihelix   2 WtkqevlaLiearremeerlrrgk..lkkplWeevskkmrergferspkqCkekwenlnkrykki 64 
                 W++qe+++ i++r e++ +++++k    k+lWe v+  m erg++rs +qCk kw+nl +ryk i
  PHU08635.1  68 WSNQEIRDFIAIRGELQIEFSSTKrsNLKNLWEIVGVWMNERGYRRSGEQCKIKWKNLITRYKDI 132
                 ********************975422669*********************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 161 aa     Download sequence    
MFGGNENVGS FMQHLMRPQL PHHLSPHGSI SIAAGGGSSS ASGRSSSVGD RLGRDDEFAT  60
RDGHVPPWSN QEIRDFIAIR GELQIEFSST KRSNLKNLWE IVGVWMNERG YRRSGEQCKI  120
KWKNLITRYK DIPPERYFTL PNKNVLSICS LTVDFLACHL E
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G01380.12e-18Trihelix family protein