PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU08636.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

Trihelix

Protein Properties

Length: 141aa MW: 16223.7 Da PI: 9.5981

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU08636.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	58.9	1.3e-18	48	111	2	63
trihelix 2 WtkqevlaLiearremeerlrrgk..lkkplWeevskkmrergferspkqCkekwenlnkrykk 63 W++qe+++Li++r e++ ++++++ k+lWe v+ +m+erg++rs +qCk+kw+ l +ryk PHU08636.1 48 WSNQEIRDLIAIRGELQIEFSSTNrsNLKNLWEIVGVRMSERGYRRSGEQCKSKWKTLVTRYKD 111 ******************975421669*******************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 141 aa Download sequence
MQHLMRLQLP HRLPPCGSIS AVVGSSSVGG RLGRDDEFAK QDNRVPPWSN QEIRDLIAIR 60 GELQIEFSST NRSNLKNLWE IVGVRMSERG YRRSGEQCKS KWKTLVTRYK DMPPERYFTL 120 PNKDVLSVCS LTVYFLACHL E

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G01380.1	3e-20	Trihelix family protein