PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU08637.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family Trihelix
Protein Properties Length: 179aa    MW: 19854.6 Da    PI: 9.5799
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU08637.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix50.45.8e-1647113265
    trihelix   2 WtkqevlaLiearremeerlrrgk..lkkplWeevskkm.rergferspkqCkekwenlnkrykkik 65 
                 W+++ +++Li++r+e+e ++ ++k    k+lWe v+ +m +++g++rs +qCk  w+nl +ryk ++
  PHU08637.1  47 WSNEGIRDLIAIRSELEAEFTSAKrsNLKNLWEIVGVRMnERGGYRRSGEQCKTMWNNLINRYKVLN 113
                 *********************86522669**********77889********************776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 179 aa     Download sequence    
MFSGDNENIG PFTHPLRLLP ARSISVAAAV AVAGIDGLGG DDRVPPWSNE GIRDLIAIRS  60
ELEAEFTSAK RSNLKNLWEI VGVRMNERGG YRRSGEQCKT MWNNLINRYK VLNCYSREVA  120
GKVAVMSPQG DRFKPLEPSL AAMQGKAAYS RPSWSCSSPD PTRRAALCFT EFNEVRKSF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G01380.16e-17Trihelix family protein