PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU08686.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

G2-like

Protein Properties

Length: 359aa MW: 40319.4 Da PI: 7.4447

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU08686.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	102.2	3.2e-32	182	235	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt++LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ PHU08686.1 182 PRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 235 9****************************************************7 PP
2	Myb_DNA-binding	46.9	6.3e-15	183	234	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT ++ ++v+av++lGg+ t+k++ + m k +tl ++ks++q+y+ PHU08686.1 183 RMRWTSTLHARFVHAVELLGGHeraTPKSVLELMDvKDLTLAHVKSHLQMYR 234 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 359 aa Download sequence
MELFPSQLDL SLQISPPNTT TTTTHEEENN NMDLGFWTRA LESRKPHNNI HTNTSCFDLS 60 LSSNIPKPSS INININTTTH QEPNYPSSQY FINNPFSTPH HHHHNNLGYF RPISGVPLYN 120 NQNPTTTLPI IPSSHPNTFN NYNINPISSS NSHFQSYNHH QNGLMRSRFF SRFPAKRSMR 180 APRMRWTSTL HARFVHAVEL LGGHERATPK SVLELMDVKD LTLAHVKSHL QMYRTVKTTD 240 KSAAGAASSG QSEVFDNVSS GDNSDDLVLE IQNSNKSEFS SVHNYGGLWS NSSSRESWQL 300 HGNNLEDYHG NIPSLKKDME AKCTSYEGIS TEVSSSSITH EASPKKPNLN FTLGFPNIS

Sequence ? help Back to Top

Protein Sequence Length: 359 aa Download sequence

MELFPSQLDL SLQISPPNTT TTTTHEEENN NMDLGFWTRA LESRKPHNNI HTNTSCFDLS  60
LSSNIPKPSS INININTTTH QEPNYPSSQY FINNPFSTPH HHHHNNLGYF RPISGVPLYN  120
NQNPTTTLPI IPSSHPNTFN NYNINPISSS NSHFQSYNHH QNGLMRSRFF SRFPAKRSMR  180
APRMRWTSTL HARFVHAVEL LGGHERATPK SVLELMDVKD LTLAHVKSHL QMYRTVKTTD  240
KSAAGAASSG QSEVFDNVSS GDNSDDLVLE IQNSNKSEFS SVHNYGGLWS NSSSRESWQL  300
HGNNLEDYHG NIPSLKKDME AKCTSYEGIS TEVSSSSITH EASPKKPNLN FTLGFPNIS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32240.1	5e-64	G2-like family protein