PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU08816.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

Protein Properties

Length: 382aa MW: 44782.3 Da PI: 8.6458

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU08816.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	38.2	2.5e-12	15	95	8	99
-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 8 sdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 +k+g l +p f+ ++ g ++ ++ + g++W vkl + ++ +++GW++F ++++++ g ++vF+++g++ef v++f++ PHU08816.1 15 QPGFKNG-LKIPIGFL-KYlkG-HY-QHG-HVILKRAGKKWMVKL--NEHR----FEEGWEKFSEEHDVQLGYMLVFRHEGNMEF--EVSIFDS 95 4455665.******.66553.43.332.455667*****..7776....9**********************99999..9999986 PP
2	B3	43.2	7e-14	178	254	17	98
E--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 17 vlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 +lpkkf+ ++g+ k+++ l+++de+ rsW+++l ++++ +vl+ GW++F angLk+gD +F+++ +++++ k+++ PHU08816.1 178 RLPKKFVLANGYAKTCP--LVIRDERQRSWNLRL--ASYGSGiHVLG-GWNKFHLANGLKVGDRKMFEVVT-NGEKPIWKFHD 254 79*********9998..***********..55554549999.******************876.55556666655 PP
3	B3	49.9	5.9e-16	279	359	6	90
..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS B3 6 tpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 ++++ l+ ++l++pkkfa ++++++ ++++l+++de+ r W+++l+y + ++ +++GW eF an LkegD v+F+++ + ++ PHU08816.1 279 IRPYCLSYDILYIPKKFAHANDLIN-KKRDLIVRDERQRLWDLRLCYF--GTGVCMKGGWHEFRYANCLKEGDRVMFEVVAN-GE 359 67889999***********8885.5579***********555..55699*********************8774.33 PP

Sequence ? help Back to Top
Protein Sequence Length: 382 aa Download sequence
MKIPPKKPHF FKPIQPGFKN GLKIPIGFLK YLKGHYQHGH VILKRAGKKW MVKLNEHRFE 60 EGWEKFSEEH DVQLGYMLVF RHEGNMEFEV SIFDSTHCDR EYVEYIQVEE KEKDGEEVDK 120 EEEEEEGETS KKFEFDDKPN PCIMSSSRPF PNTEEVSTRF VFTVKPYCLT CGFLSFQRLP 180 KKFVLANGYA KTCPLVIRDE RQRSWNLRLA SYGSGIHVLG GWNKFHLANG LKVGDRKMFE 240 VVTNGEKPIW KFHDKPSPSI KSSNASFRPF VHSHFECDIR PYCLSYDILY IPKKFAHAND 300 LINKKRDLIV RDERQRLWDL RLCYFGTGVC MKGGWHEFRY ANCLKEGDRV MFEVVANGEK 360 PIWQFHGKKG YDKNASIVQG ND

Sequence ? help Back to Top

Protein Sequence Length: 382 aa Download sequence

MKIPPKKPHF FKPIQPGFKN GLKIPIGFLK YLKGHYQHGH VILKRAGKKW MVKLNEHRFE  60
EGWEKFSEEH DVQLGYMLVF RHEGNMEFEV SIFDSTHCDR EYVEYIQVEE KEKDGEEVDK  120
EEEEEEGETS KKFEFDDKPN PCIMSSSRPF PNTEEVSTRF VFTVKPYCLT CGFLSFQRLP  180
KKFVLANGYA KTCPLVIRDE RQRSWNLRLA SYGSGIHVLG GWNKFHLANG LKVGDRKMFE  240
VVTNGEKPIW KFHDKPSPSI KSSNASFRPF VHSHFECDIR PYCLSYDILY IPKKFAHAND  300
LINKKRDLIV RDERQRLWDL RLCYFGTGVC MKGGWHEFRY ANCLKEGDRV MFEVVANGEK  360
PIWQFHGKKG YDKNASIVQG ND

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G24645.1	5e-38	B3 family protein