PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU08818.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family B3
Protein Properties Length: 298aa    MW: 34941.1 Da    PI: 4.3083
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU08818.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3391.4e-121522291399
                 TT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
          B3  13 sgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                 ++++ +p  f+ ++ +g+  e+++     ++g++W+vk+  ++++   + +++W +Fv++ +L++g ++vF+++g++ef   v++f++
  PHU08818.1 152 ESLFKIPIGFL-KYlKGQ--EHVKCGALKRDGKKWRVKV--NGRK---LEEGNWGKFVEEFDLQVGNILVFSHEGNMEF--EVSIFDS 229
                 567899****9.554767..677899999**********..7776...77999*********************99999..9999986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    
MFEIRFSDFE TRMMLVSEQT KIGHKESLGG FQKKTRIEWD VWAFMVWDVR HGKALVRVVR  60
NLVSKNGSWF QGVSEIASGR VLFMDFKNCA RTCEESVSAS ECIDSSVSFD SDEIVLLSLR  120
FMIIVRVHAY DKESCTLLVP SIMSFQFVQQ SESLFKIPIG FLKYLKGQEH VKCGALKRDG  180
KKWRVKVNGR KLEEGNWGKF VEEFDLQVGN ILVFSHEGNM EFEVSIFDSS QCSREYAEYM  240
QEDVVEDEMD VDKEEEEEHE YEVEEEEEYE YEEDEEEEEE EEVATHDKPC EKSHFEYA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31690.18e-13B3 family protein