PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU08820.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family B3
Protein Properties Length: 185aa    MW: 21911.3 Da    PI: 4.2659
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU08820.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B351.42e-161595899
                -HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
          B3  8 sdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99
                   +k+g l +p  f+ ++ +g    +++ ++  + g++W vkl  ++++    l++GW++Fv++++L+ gD+++F+++g+++f   v++f++
  PHU08820.1 15 LPGFKNG-LKIPIGFL-KYlKGH--DHIEHVVLKRAGNKWLVKL--NGRR----LEDGWEKFVEEHDLQLGDMLIFRHEGDMDF--DVSIFDS 95
                4566666.********.664555..567899999**********..8888....******************************..9999986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 185 aa     Download sequence    
MEIPPKKAHF FKPILPGFKN GLKIPIGFLK YLKGHDHIEH VVLKRAGNKW LVKLNGRRLE  60
DGWEKFVEEH DLQLGDMLIF RHEGDMDFDV SIFDSTHCDT EYAEYKQIQE EKDKRVEHEN  120
EDDEVVEDEN DEEEEQEEDD DDDEDDEVYT LDRPFGRSHF EFTIRQYCLS KGFMMDGENS  180
VLIIA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31690.13e-26B3 family protein