PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU08822.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

Protein Properties

Length: 574aa MW: 65967.9 Da PI: 7.0764

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU08822.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	48.2	1.9e-15	16	95	10	99
HHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 10 vlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 + ++ l++p f+ ++ +g +++ ++ + g+sW vk+ ++++ +++GW Fv++++L+ gD ++F+++g++ef v++f++ PHU08822.1 16 KGFKHGLTIPTGFL-KYlKGR--DQIEHVVLRSGGKSWLVKV--KGCR----FKAGWAAFVEEHDLQLGDLLIFRHEGDMEF--EVSIFDS 95 445566******.664555..5678888899*****..6666....9*********************999999..9999986 PP
2	B3	59.5	6e-19	159	244	6	95
..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 6 tpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 ++ + +++ l+lpk+fa+++g++ ++ l+++de+ rsW+++l + + + ++++GW+eF+ +n++k+gD + F+++ +++++ +k PHU08822.1 159 VSRYCISNSYLYLPKRFARANGLIDKK-CGLVIRDERHRSWNLRL--DTNNAGLYIGEGWREFCVDNDMKVGDCIKFEVVT-NGEKPILK 244 5678889999*********776543.46***********..99999************************876.45555555 PP
3	B3	52.3	1e-16	263	342	6	88
..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS B3 6 tpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 ++++ + s+ lv+p kfa ++ +++++ +l+++de+ rsW+vkl +++++++++G eF +an LkegD ++F+++++ PHU08822.1 263 VRPYCFVSDSLVIPTKFALANRLSNKR-CDLIIRDERERSWNVKL--HSSGNSVYIRGGCHEFRDANCLKEGDCIIFEVVSNG 342 6678888999*********666433.48***********..999999***********************87753 PP

Sequence ? help Back to Top
Protein Sequence Length: 574 aa Download sequence
MKIPPEKPHF IKPIQKGFKH GLTIPTGFLK YLKGRDQIEH VVLRSGGKSW LVKVKGCRFK 60 AGWAAFVEEH DLQLGDLLIF RHEGDMEFEV SIFDSSHCDR EYAEYLQEEE GCDNVEETSK 120 NFKFKGKSKL CIMSSSKAFT HADAGTHNPC GQSHFECTVS RYCISNSYLY LPKRFARANG 180 LIDKKCGLVI RDERHRSWNL RLDTNNAGLY IGEGWREFCV DNDMKVGDCI KFEVVTNGEK 240 PILKFHGAGT HKPFGQSHFV CIVRPYCFVS DSLVIPTKFA LANRLSNKRC DLIIRDERER 300 SWNVKLHSSG NSVYIRGGCH EFRDANCLKE GDCIIFEVVS NGNTPIWKYN GSTVRVVKII 360 SRIKTRSNGG RFEAVWAAFV EEHDLQMGDL LIFRHEGDME FEVSIFDSSR RNREYAEYLQ 420 EEGGCNNVEE TSKNFEFKDA GTHNPCDQSH FECTVKPYCI SNGYLVKYAD SLHSTLDSFT 480 RVEKLDDPEI RLTCEQCYMQ VLIEKQLMLY NAHSVAVFHL KRFQNDGSVV RKVDKHVAFP 540 LELDLLPYTE NNQTNNVNIC YLNELNEYFL VANK

Sequence ? help Back to Top

Protein Sequence Length: 574 aa Download sequence

MKIPPEKPHF IKPIQKGFKH GLTIPTGFLK YLKGRDQIEH VVLRSGGKSW LVKVKGCRFK  60
AGWAAFVEEH DLQLGDLLIF RHEGDMEFEV SIFDSSHCDR EYAEYLQEEE GCDNVEETSK  120
NFKFKGKSKL CIMSSSKAFT HADAGTHNPC GQSHFECTVS RYCISNSYLY LPKRFARANG  180
LIDKKCGLVI RDERHRSWNL RLDTNNAGLY IGEGWREFCV DNDMKVGDCI KFEVVTNGEK  240
PILKFHGAGT HKPFGQSHFV CIVRPYCFVS DSLVIPTKFA LANRLSNKRC DLIIRDERER  300
SWNVKLHSSG NSVYIRGGCH EFRDANCLKE GDCIIFEVVS NGNTPIWKYN GSTVRVVKII  360
SRIKTRSNGG RFEAVWAAFV EEHDLQMGDL LIFRHEGDME FEVSIFDSSR RNREYAEYLQ  420
EEGGCNNVEE TSKNFEFKDA GTHNPCDQSH FECTVKPYCI SNGYLVKYAD SLHSTLDSFT  480
RVEKLDDPEI RLTCEQCYMQ VLIEKQLMLY NAHSVAVFHL KRFQNDGSVV RKVDKHVAFP  540
LELDLLPYTE NNQTNNVNIC YLNELNEYFL VANK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G24700.1	6e-44	B3 family protein